Module 7 — Wiring it up: axon guidance and the formation of each pathway

cajun new wave, choral bedroom pop, acoustic funk, arabic pop · 4:24

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Lyrics

[Verse 1]
Before the granule cells exist, entorhinal axons arrive
Swimming through the marginal zone, prenatal and alive
Cajal-Retzius guideposts waiting in lacunosum-moleculare
Reelin signals mark the spot where terminals declare
Lateral takes the outer band, medial middle ground
Ephrin gradients draw the map, topography is found

[Chorus]
Lamina-specific, topographically precise
Molecular instructions guide each axon splice
Semaphorins repel and push, Netrins pull them near
Slit and Robo mark the lanes, pathways crystal clear
Birth order sets the sequence, loop formation flows
From perforant to return, each connection knows

[Verse 2]
Mossy fibers wake up late, postnatal pioneers
Growing into stratum lucidum through the early years
Giant boutons detonate on CA3 proximal trees
Class 3 Semaphorins fence the zone, keep them from the breeze
Granule cells born after birth, two to three weeks long
Must find their narrow targeting, detonator strong

[Chorus]
Lamina-specific, topographically precise
Molecular instructions guide each axon splice
Semaphorins repel and push, Netrins pull them near
Slit and Robo mark the lanes, pathways crystal clear
Birth order sets the sequence, loop formation flows
From perforant to return, each connection knows

[Bridge]
Schaffer collaterals branch from CA3 pyramids
Seeking CA1 radiatum, where their synapse lives
Guidance cues in layers stack like geological time
Each pathway finds its destined band, molecular sublime
Return fibers close the loop, subicular relay
Hippocampal circuit wired in systematic way

[Verse 3]
Eph receptors read the code, position maps align
Neuropilins catch the scent of chemorepulsive signs
DCC receptors chase Netrin, attractive force so strong
Robo sensors dodge the Slit, keep axons moving along
Guidepost cells illuminate the roads between each zone
Pioneer pathfinders carve routes through tissue unknown

[Verse 4]
Activity shapes the final form, use-dependent change
Silent synapses compete while connections rearrange
NMDA gates swing open when pre and post align
Calcium floods trigger growth, molecular design
Pruning cuts the excess back, refines the growing tree
Developmental programs end, adult circuitry

[Chorus]
Lamina-specific, topographically precise
Molecular instructions guide each axon splice
Semaphorins repel and push, Netrins pull them near
Slit and Robo mark the lanes, pathways crystal clear
Birth order sets the sequence, loop formation flows
From perforant to return, each connection knows

[Outro]
Four pathways interwoven, guidance symphony complete
Molecular choreography makes the circuit sweet

← Module 6 — Building the structure: patterning, neurogenesis, and migration | Module 8 — Activity-dependent refinement: GABA, GDPs, and silent synapses →